Pseudomonas fluorescens F113, PSF113_3210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3210
Name
Replicon chromosome
Genomic location 3780328 - 3781233 (+ strand)

Cross-References

RefSeq YP_005208604.1
GI 378951116
Entrez 11831302
INSDC AEV63209.1
NCBI Locus Tag PSF113_3210
UniParc UPI00023B44A6
UniProtKB Acc G8Q6I0
UniProtKB ID G8Q6I0_PSEFL
UniRef100 UniRef100_G8Q6I0
UniRef50 UniRef50_Q9I2B1
UniRef90 UniRef90_G8Q6I0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase
Synonyms
Evidence for Translation
Charge (pH 7) -2.16
Kyte-Doolittle Hydrophobicity Value 0.058
Molecular Weight (kDa) 33.2
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 546 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003437 (1043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3210

Human Homologs

References

No references are associated with this feature.