Pseudomonas fluorescens Pf0-1, Pfl01_3039

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3039
Name
Replicon chromosome
Genomic location 3477837 - 3479024 (+ strand)

Cross-References

RefSeq YP_348768.1
GI 77459261
Entrez 3712723
INSDC ABA74777.1
NCBI Locus Tag Pfl01_3039
UniParc UPI0000387456
UniProtKB Acc Q3KBS7
UniProtKB ID Q3KBS7_PSEPF
UniRef100 UniRef100_Q3KBS7
UniRef50 UniRef50_Q4KBT4
UniRef90 UniRef90_Q3KBS7

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -6.83
Kyte-Doolittle Hydrophobicity Value 0.108
Molecular Weight (kDa) 43541.8
Isoelectric Point (pI) 5.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001731 (376 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3039

Human Homologs

References

No references are associated with this feature.