Pseudomonas aeruginosa 39016, PA39016_002040036
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa 39016 - Assembly GCF_000148745.1
GCF_000148745.1|latest |
| Locus Tag |
PA39016_002040036
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5866069 - 5867205 (- strand) |
Cross-References
| RefSeq | WP_003095209.1 |
| GI | 489185789 |
| NCBI Locus Tag | PA39016_002040036 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
carbamoyl phosphate synthase small subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.23 |
| Kyte-Doolittle Hydrophobicity Value | -0.148 |
| Molecular Weight (kDa) | 40.8 |
| Isoelectric Point (pI) | 5.23 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004402 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA39016_002040036
Search term: carbamoyl phosphate synthase small subunit
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value:
4.0e-62
Percent Identity:
38.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value:
4.0e-62
Percent Identity:
38.9
|
References
No references are associated with this feature.