Pseudomonas aeruginosa 39016, PA39016_000870080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa 39016 - Assembly GCF_000148745.1
GCF_000148745.1|latest |
| Locus Tag |
PA39016_000870080
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5578684 - 5580984 (- strand) |
Cross-References
| RefSeq | WP_003094598.1 |
| GI | 489185173 |
| NCBI Locus Tag | PA39016_000870080 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TonB-denpendent receptor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.586 |
| Molecular Weight (kDa) | 83.6 |
| Isoelectric Point (pI) | 5.57 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5NEC | MEMBRANE PROTEIN | 03/10/17 | Crystal structure of the siderophore receptor PiuD from Pseudomonas aeruginosa | Pseudomonas aeruginosa 39016 | 2.3 | X-RAY DIFFRACTION | 99.9 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000149 (2669 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA39016_000870080
Search term: TonB-denpendent receptor
|
Human Homologs
References
No references are associated with this feature.