Pseudomonas aeruginosa 39016, PA39016_003040018
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa 39016 - Assembly GCF_000148745.1
GCF_000148745.1|latest |
| Locus Tag |
PA39016_003040018
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2346558 - 2349695 (- strand) |
Cross-References
| RefSeq | WP_003088621.1 |
| GI | 489179121 |
| NCBI Locus Tag | PA39016_003040018 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hydrogenase expression protein HypA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.58 |
| Kyte-Doolittle Hydrophobicity Value | 0.343 |
| Molecular Weight (kDa) | 112.7 |
| Isoelectric Point (pI) | 6.24 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| mexY | MexY is the RND-type membrane protein of the efflux complex MexXY-OprM. [PMID:9925549] | ARO:3003033 | protein homolog model | Strict | 1805.8 | 93.69 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000417 (2093 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA39016_003040018
Search term: hydrogenase expression protein HypA
|
Human Homologs
References
No references are associated with this feature.