Pseudomonas aeruginosa 39016, PA39016_000110151
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa 39016 - Assembly GCF_000148745.1
GCF_000148745.1|latest |
| Locus Tag |
PA39016_000110151
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1062470 - 1063528 (+ strand) |
Cross-References
| RefSeq | WP_003086123.1 |
| GI | 489176601 |
| NCBI Locus Tag | PA39016_000110151 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Holliday junction DNA helicase RuvB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.30 |
| Kyte-Doolittle Hydrophobicity Value | -0.141 |
| Molecular Weight (kDa) | 38.9 |
| Isoelectric Point (pI) | 5.18 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7X5B | MOTOR PROTEIN | 03/04/22 | Crystal structure of RuvB | Pseudomonas aeruginosa PAO1 | 2.16 | X-RAY DIFFRACTION | 99.7 |
| 7X7Q | RECOMBINATION/DNA | 03/10/22 | CryoEM structure of RuvA-RuvB-Holliday junction complex | Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 7.02 | ELECTRON MICROSCOPY | 100.0 |
| 7X7P | MOTOR PROTEIN/DNA | 03/10/22 | CryoEM structure of dsDNA-RuvB-RuvA domain3 complex | Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 7.02 | ELECTRON MICROSCOPY | 100.0 |
| 6BLB | HYDROLASE | 11/09/17 | 1.88 Angstrom Resolution Crystal Structure Holliday Junction ATP-dependent DNA Helicase (RuvB) from Pseudomonas aeruginosa in Complex with ADP | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.88 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000932 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA39016_000110151
Search term: Holliday junction DNA helicase RuvB
|
Human Homologs
References
No references are associated with this feature.