Pseudomonas sp. GM30, PMI25_001849

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM30
GCF_000282275.2|latest
Locus Tag
PMI25_001849
Name
Replicon ctg5
Genomic location 131486 - 132952 (+ strand)

Cross-References

RefSeq WP_007965194.1
GI 495240431
INSDC EUB83916.1
NCBI Locus Tag PMI25_001849
UniParc UPI00026FF2D6
UniProtKB Acc W6VG50
UniProtKB ID W6VG50_9PSED
UniRef100 UniRef100_W6VG50
UniRef50 UniRef50_Q887N8
UniRef90 UniRef90_Q887N8

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) 0.82
Kyte-Doolittle Hydrophobicity Value -0.382
Molecular Weight (kDa) 54.3
Isoelectric Point (pI) 7.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001808 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI25_001849
Search term: RNA helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 1.3e-65
Percent Identity: 39.2

References

No references are associated with this feature.