Pseudomonas sp. GM30, PMI25_001764

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM30
GCF_000282275.2|latest
Locus Tag
PMI25_001764
Name
Replicon ctg5
Genomic location 33721 - 35769 (+ strand)

Cross-References

RefSeq WP_024164481.1
GI 584600093
INSDC EUB83831.1
NCBI Locus Tag PMI25_001764
UniParc UPI0003E7DC5F
UniProtKB Acc W6VFY2
UniProtKB ID W6VFY2_9PSED
UniRef100 UniRef100_W6VFY2
UniRef50 UniRef50_G8Q3S5
UniRef90 UniRef90_W6VFY2

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system Vgr family protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.44
Kyte-Doolittle Hydrophobicity Value -0.566
Molecular Weight (kDa) 76.5
Isoelectric Point (pI) 6.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3342 members)
Putative Inparalogs 1 predicted inparalogs
type VI secretion system Vgr family protein (PMI25_002580) 95.7% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI25_001764

Human Homologs

References

No references are associated with this feature.