Pseudomonas sp. GM30, PMI25_002920

Gene Feature Overview

Strain	Pseudomonas sp. GM30 GCF_000282275.2|latest
Locus Tag	PMI25_002920
Name
Replicon	ctg8
Genomic location	163428 - 164831 (- strand)

Cross-References

RefSeq	WP_007963648.1
GI	495238883
INSDC	EUB83005.1
NCBI Locus Tag	PMI25_002920
UniParc	UPI0002702CD3
UniProtKB Acc	W6VWX6
UniProtKB ID	W6VWX6_9PSED
UniRef100	UniRef100_W6VWX6
UniRef50	UniRef50_A0A078KWT9
UniRef90	UniRef90_W6VWX6

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-11.69
Kyte-Doolittle Hydrophobicity Value	0.004
Molecular Weight (kDa)	51.3
Isoelectric Point (pI)	4.90

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001312 (602 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI25_002920 Search term: ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000467882 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 6.4e-17 Percent Identity: 24.3
Ensembl 110, assembly GRCh38.p14	ENSP00000376443 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 6.4e-17 Percent Identity: 24.3
Ensembl 110, assembly GRCh38.p14	ENSP00000465351 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35] E-value: 6.4e-17 Percent Identity: 24.3

References