Pseudomonas sp. HPB0071, HMPREF1487_08742

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_08742
NCBI Locus Tag	HMPREF1487_RS21700
Name
Replicon	scaffold_2
Genomic location	476636 - 477403 (- strand)

Cross-References

RefSeq	WP_010798898.1
GI	498498176
INSDC	ENA28414.1
NCBI Locus Tag	HMPREF1487_RS21700
NCBI Old Locus Tag	HMPREF1487_08742
UniParc	UPI0002CA35E2
UniProtKB Acc	N2INR1
UniProtKB ID	N2INR1_9PSED
UniRef100	UniRef100_N2INR1
UniRef50	UniRef50_C3K234
UniRef90	UniRef90_N2INR1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.00
Kyte-Doolittle Hydrophobicity Value	0.079
Molecular Weight (kDa)	27.8
Isoelectric Point (pI)	6.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001543 (890 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_08742

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000374312 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637] E-value: 5.9e-17 Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14	ENSP00000272895 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637] E-value: 5.9e-17 Percent Identity: 26.8

References