Pseudomonas sp. HPB0071, HMPREF1487_08721

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_08721
NCBI Locus TagHMPREF1487_RS21595
Name
Replicon scaffold_2
Genomic location 453774 - 455180 (+ strand)

Cross-References

RefSeq WP_010798877.1
GI 498498155
INSDC ENA28393.1
NCBI Locus Tag HMPREF1487_RS21595
NCBI Old Locus Tag HMPREF1487_08721
UniParc UPI0002CA36EE
UniProtKB Acc N2J3M3
UniProtKB ID N2J3M3_9PSED
UniRef100 UniRef100_N2J3M3
UniRef50 UniRef50_A6VSG6
UniRef90 UniRef90_N2J3M3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.27
Kyte-Doolittle Hydrophobicity Value 0.949
Molecular Weight (kDa) 50.1
Isoelectric Point (pI) 8.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_08721

Human Homologs

References

No references are associated with this feature.