Pseudomonas sp. HPB0071, HMPREF1487_08214

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_08214
NCBI Locus TagHMPREF1487_RS19230
Name
Replicon scaffold_1
Genomic location 4158589 - 4159605 (- strand)

Cross-References

RefSeq WP_010798378.1
GI 498497651
INSDC ENA29960.1
NCBI Locus Tag HMPREF1487_RS19230
NCBI Old Locus Tag HMPREF1487_08214
UniParc UPI0002CB73B8
UniProtKB Acc N2IY50
UniProtKB ID N2IY50_9PSED
UniRef100 UniRef100_N2IY50
UniRef50 UniRef50_Q9I0Z1
UniRef90 UniRef90_N2IY50

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.80
Kyte-Doolittle Hydrophobicity Value 0.161
Molecular Weight (kDa) 36.1
Isoelectric Point (pI) 4.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003064 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_08214

Human Homologs

References

No references are associated with this feature.