Pseudomonas sp. HPB0071, HMPREF1487_08195

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_08195
NCBI Locus Tag	HMPREF1487_RS19150
Name
Replicon	scaffold_1
Genomic location	4130521 - 4132584 (- strand)

Cross-References

RefSeq	WP_010798359.1
GI	498497632
INSDC	ENA29941.1
NCBI Locus Tag	HMPREF1487_RS19150
NCBI Old Locus Tag	HMPREF1487_08195
UniParc	UPI0002CAB423
UniProtKB Acc	N2J1Y2
UniProtKB ID	N2J1Y2_9PSED
UniRef100	UniRef100_N2J1Y2
UniRef50	UniRef50_L0GIW8
UniRef90	UniRef90_N2J1Y2

Product

Feature Type	CDS
Coding Frame	1
Product Name	PAS domain S-box protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.38
Kyte-Doolittle Hydrophobicity Value	-0.255
Molecular Weight (kDa)	78.1
Isoelectric Point (pI)	6.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000583 (524 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_08195 Search term: PAS domain S-box protein

Human Homologs

References