Pseudomonas sp. HPB0071, HMPREF1487_07867
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. HPB0071
GCF_000478505.2|latest |
| Locus Tag |
HMPREF1487_07867
|
| NCBI Locus Tag | HMPREF1487_RS17560 |
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 3777548 - 3778933 (- strand) |
Cross-References
| RefSeq | WP_010798032.1 |
| GI | 498497305 |
| NCBI Locus Tag | HMPREF1487_RS17560 |
| NCBI Old Locus Tag | HMPREF1487_07867 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 6.24 |
| Kyte-Doolittle Hydrophobicity Value | 0.059 |
| Molecular Weight (kDa) | 51.8 |
| Isoelectric Point (pI) | 8.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3R5G | LYASE | 03/18/11 | Crystal structure of the adenylyl cyclase CyaB from P. aeruginosa | Pseudomonas aeruginosa | 1.5 | X-RAY DIFFRACTION | 93.4 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002398 (355 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: HMPREF1487_07867
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
guanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]
E-value:
3.2e-13
Percent Identity:
28.0
|
References
No references are associated with this feature.