Pseudomonas sp. HPB0071, HMPREF1487_07747

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_07747
NCBI Locus Tag	HMPREF1487_RS16970
Name
Replicon	scaffold_1
Genomic location	3644566 - 3645630 (+ strand)

Cross-References

RefSeq	WP_010797913.1
GI	498497186
INSDC	ENA29494.1
NCBI Locus Tag	HMPREF1487_RS16970
NCBI Old Locus Tag	HMPREF1487_07747
UniParc	UPI0002CBC180
UniProtKB Acc	N2IRN6
UniProtKB ID	N2IRN6_9PSED
UniRef100	UniRef100_N2IRN6
UniRef50	UniRef50_P55294
UniRef90	UniRef90_N2IRN6

Product

Feature Type	CDS
Coding Frame	1
Product Name	dTDP-glucose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.75
Kyte-Doolittle Hydrophobicity Value	-0.227
Molecular Weight (kDa)	39.5
Isoelectric Point (pI)	5.54

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004752 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_07747 Search term: dTDP-glucose 4,6-dehydratase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000363621 UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116] E-value: 1.1e-13 Percent Identity: 26.4
Ensembl 110, assembly GRCh38.p14	ENSP00000483375 UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116] E-value: 1.1e-13 Percent Identity: 26.4

References