Pseudomonas sp. HPB0071, HMPREF1487_07737

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_07737
NCBI Locus Tag	HMPREF1487_RS16920
Name
Replicon	scaffold_1
Genomic location	3632810 - 3633094 (+ strand)

Cross-References

RefSeq	WP_010797903.1
GI	498497176
INSDC	ENA29484.1
NCBI Locus Tag	HMPREF1487_RS16920
NCBI Old Locus Tag	HMPREF1487_07737
UniParc	UPI0002CA7CA1
UniProtKB Acc	N2IRM7
UniProtKB ID	N2IRM7_9PSED
UniRef100	UniRef100_N2IRM7
UniRef50	UniRef50_Q21IT4
UniRef90	UniRef90_N2IRM7

Product

Feature Type	CDS
Coding Frame	1
Product Name	integration host factor subunit beta
Synonyms
Evidence for Translation
Charge (pH 7)	1.47
Kyte-Doolittle Hydrophobicity Value	-0.682
Molecular Weight (kDa)	10.6
Isoelectric Point (pI)	9.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002454 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_07737 Search term: integration host factor subunit beta

Human Homologs

References