Pseudomonas sp. HPB0071, HMPREF1487_07667

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_07667
NCBI Locus Tag	HMPREF1487_RS16565
Name
Replicon	scaffold_1
Genomic location	3557291 - 3558508 (- strand)

Cross-References

RefSeq	WP_010797836.1
GI	498497108
INSDC	ENA30767.1
NCBI Locus Tag	HMPREF1487_RS16565
NCBI Old Locus Tag	HMPREF1487_07667
UniParc	UPI0002C9DF8F
UniProtKB Acc	N2ITG3
UniProtKB ID	N2ITG3_9PSED
UniRef100	UniRef100_N2ITG3
UniRef50	UniRef50_Q02K94
UniRef90	UniRef90_N2ITG3

Product

Feature Type	CDS
Coding Frame	1
Product Name	3-oxoacyl-[acyl-carrier-protein] synthase 1
Synonyms
Evidence for Translation
Charge (pH 7)	-9.73
Kyte-Doolittle Hydrophobicity Value	-0.090
Molecular Weight (kDa)	43.0
Isoelectric Point (pI)	4.94

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
7PPS	TRANSFERASE	09/15/21	apo FabB from Pseudomonas aeruginosa with single point mutation C161A	Pseudomonas aeruginosa PA14	1.3	X-RAY DIFFRACTION	91.1

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003761 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_07667 Search term: 3-oxoacyl-[acyl-carrier-protein] synthase 1

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000280701 3-oxoacyl-ACP synthase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26063] E-value: 1.4e-52 Percent Identity: 35.0

References