Pseudomonas sp. HPB0071, HMPREF1487_07602

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_07602
NCBI Locus TagHMPREF1487_RS16245
Name
Replicon scaffold_1
Genomic location 3487201 - 3488181 (+ strand)

Cross-References

RefSeq WP_010797771.1
GI 498497043
INSDC ENA30702.1
NCBI Locus Tag HMPREF1487_RS16245
NCBI Old Locus Tag HMPREF1487_07602
UniParc UPI0002C9B2C7
UniProtKB Acc N2ITA3
UniProtKB ID N2ITA3_9PSED
UniRef100 UniRef100_N2ITA3
UniRef50 UniRef50_A0A0B7DBL0
UniRef90 UniRef90_N2ITA3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.65
Kyte-Doolittle Hydrophobicity Value -0.067
Molecular Weight (kDa) 34.7
Isoelectric Point (pI) 4.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002715 (536 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (HMPREF1487_08731) 70.5% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_07602

Human Homologs

References

No references are associated with this feature.