Pseudomonas sp. HPB0071, HMPREF1487_07229

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_07229
NCBI Locus TagHMPREF1487_RS14435
Name
Replicon scaffold_1
Genomic location 3086925 - 3087809 (- strand)

Cross-References

RefSeq WP_010797401.1
GI 498496672
INSDC ENA31798.1
NCBI Locus Tag HMPREF1487_RS14435
NCBI Old Locus Tag HMPREF1487_07229
UniParc UPI0002CBCA37
UniProtKB Acc N2JD60
UniProtKB ID N2JD60_9PSED
UniRef100 UniRef100_N2JD60
UniRef50 UniRef50_A9L4A5
UniRef90 UniRef90_N2JD60

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.74
Kyte-Doolittle Hydrophobicity Value -0.170
Molecular Weight (kDa) 33.2
Isoelectric Point (pI) 8.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002044 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_07229

Human Homologs

References

No references are associated with this feature.