Pseudomonas sp. HPB0071, HMPREF1487_06986

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_06986
NCBI Locus Tag	HMPREF1487_RS13225
Name
Replicon	scaffold_1
Genomic location	2824513 - 2828682 (- strand)

Cross-References

RefSeq	WP_010797162.1
GI	498496432
INSDC	ENA33252.1
NCBI Locus Tag	HMPREF1487_RS13225
NCBI Old Locus Tag	HMPREF1487_06986
UniParc	UPI0002C9C4E3
UniProtKB Acc	N2J0Q8
UniProtKB ID	N2J0Q8_9PSED
UniRef100	UniRef100_N2J0Q8
UniRef50	UniRef50_N2J0Q8
UniRef90	UniRef90_N2J0Q8

Product

Feature Type	CDS
Coding Frame	1
Product Name	PAS domain S-box protein
Synonyms
Evidence for Translation
Charge (pH 7)	-38.09
Kyte-Doolittle Hydrophobicity Value	-0.241
Molecular Weight (kDa)	157.8
Isoelectric Point (pI)	5.37

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004258 (973 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_06986 Search term: PAS domain S-box protein

Human Homologs

References