Pseudomonas sp. HPB0071, HMPREF1487_06717

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_06717
NCBI Locus Tag	HMPREF1487_RS11895
Name
Replicon	scaffold_1
Genomic location	2519095 - 2519724 (+ strand)

Cross-References

RefSeq	WP_010796895.1
GI	498496165
INSDC	ENA32984.1
NCBI Locus Tag	HMPREF1487_RS11895
NCBI Old Locus Tag	HMPREF1487_06717
UniParc	UPI0002CBCEAE
UniProtKB Acc	N2J1X1
UniProtKB ID	N2J1X1_9PSED
UniRef100	UniRef100_N2J1X1
UniRef50	UniRef50_Q4K5E9
UniRef90	UniRef90_N2J1X1

Product

Feature Type	CDS
Coding Frame	1
Product Name	polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.93
Kyte-Doolittle Hydrophobicity Value	0.133
Molecular Weight (kDa)	22.4
Isoelectric Point (pI)	4.97

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
4ZAF	LYASE	04/13/15	Structure of UbiX in complex with oxidised FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.71	X-RAY DIFFRACTION	92.8
4ZAL	LYASE	04/13/15	Structure of UbiX E49Q mutant in complex with reduced FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.62	X-RAY DIFFRACTION	92.3
4ZAZ	LYASE	04/14/15	Structure of UbiX Y169F in complex with a covalent adduct formed between reduced FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.45	X-RAY DIFFRACTION	92.3
6QLV	TRANSFERASE	02/01/19	Crystal structure of W200H UbiX in complex with a geranyl-FMN N5 adduct	Pseudomonas aeruginosa	2.391	X-RAY DIFFRACTION	92.3
6QLK	TRANSFERASE	02/01/19	Crystal structure of F181H UbiX in complex with prFMN	Pseudomonas aeruginosa	1.78	X-RAY DIFFRACTION	92.3
6QLJ	TRANSFERASE	02/01/19	Crystal structure of F181Q UbiX in complex with an oxidised N5-C1' adduct derived from DMAP	Pseudomonas aeruginosa	1.77	X-RAY DIFFRACTION	92.3
4ZAY	LYASE	04/14/15	Structure of UbiX E49Q in complex with a covalent adduct between dimethylallyl monophosphate and reduced FMN	Pseudomonas aeruginosa	1.54	X-RAY DIFFRACTION	92.3
3ZQU	LYASE	06/11/11	STRUCTURE OF A PROBABLE AROMATIC ACID DECARBOXYLASE	PSEUDOMONAS AERUGINOSA	1.5	X-RAY DIFFRACTION	92.8
6QLH	TRANSFERASE	02/01/19	Crystal structure of UbiX in complex with reduced FMN and isopentyl monophosphate	Pseudomonas aeruginosa	1.57	X-RAY DIFFRACTION	92.8
4ZAW	LYASE	04/14/15	Structure of UbiX in complex with reduced prenylated FMN	Pseudomonas aeruginosa	1.89	X-RAY DIFFRACTION	92.8
4ZAG	LYASE	04/13/15	Structure of UbiX E49Q mutant in complex with oxidised FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.68	X-RAY DIFFRACTION	92.3
4ZAN	LYASE	04/13/15	Structure of UbiX Y169F in complex with oxidised FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.76	X-RAY DIFFRACTION	92.3
6QLI	TRANSFERASE	02/01/19	Crystal structure of F181Q UbiX in complex with FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.99	X-RAY DIFFRACTION	92.3
6QLL	TRANSFERASE	02/01/19	Crystal structure of F181H UbiX in complex with FMN and dimethylallyl monophosphate	Pseudomonas aeruginosa	1.56	X-RAY DIFFRACTION	92.3
4ZAX	TRANSFERASE	04/14/15	Structure of UbiX in complex with oxidised prenylated FMN (radical)	Pseudomonas aeruginosa	1.61	X-RAY DIFFRACTION	92.8
4ZAV	LYASE	04/14/15	UbiX in complex with a covalent adduct between dimethylallyl monophosphate and reduced FMN	Pseudomonas aeruginosa	1.4	X-RAY DIFFRACTION	92.8

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001664 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_06717 Search term: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase

Human Homologs

References