Pseudomonas sp. HPB0071, HMPREF1487_06716

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_06716
NCBI Locus Tag	HMPREF1487_RS11890
Name
Replicon	scaffold_1
Genomic location	2517734 - 2519098 (+ strand)

Cross-References

RefSeq	WP_010796894.1
GI	498496164
INSDC	ENA32983.1
NCBI Locus Tag	HMPREF1487_RS11890
NCBI Old Locus Tag	HMPREF1487_06716
UniParc	UPI0002CA6593
UniProtKB Acc	N2JGC3
UniProtKB ID	N2JGC3_9PSED
UniRef100	UniRef100_N2JGC3
UniRef50	UniRef50_P37773
UniRef90	UniRef90_N2JGC3

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.82
Kyte-Doolittle Hydrophobicity Value	0.011
Molecular Weight (kDa)	48.8
Isoelectric Point (pI)	6.58

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001663 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_06716 Search term: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase

Human Homologs

References