Pseudomonas sp. HPB0071, HMPREF1487_06686

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_06686
NCBI Locus Tag	HMPREF1487_RS11740
Name
Replicon	scaffold_1
Genomic location	2491942 - 2492625 (- strand)

Cross-References

RefSeq	WP_010796864.1
GI	498496134
INSDC	ENA32953.1
NCBI Locus Tag	HMPREF1487_RS11740
NCBI Old Locus Tag	HMPREF1487_06686
UniParc	UPI0002C9C994
UniProtKB Acc	N2JG88
UniProtKB ID	N2JG88_9PSED
UniRef100	UniRef100_N2JG88
UniRef50	UniRef50_Q88QI8
UniRef90	UniRef90_N2JG88

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.81
Kyte-Doolittle Hydrophobicity Value	0.130
Molecular Weight (kDa)	23.9
Isoelectric Point (pI)	4.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Drugs Targeting this Protein

Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.

Drug Name	Source Accession	Source DB	Version	Target Accession	Target Description	Percent Identity	Alignment Length	E-Value
Lauryl Dimethylamine-N-Oxide	DB04147	DrugBank	5.1.4	P0A915	Outer membrane protein W	46.3	227	6.4e-44
(Hydroxyethyloxy)Tri(Ethyloxy)Octane	DB04233	DrugBank	5.1.4	P0A915	Outer membrane protein W	46.3	227	6.4e-44

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001618 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_06686

Human Homologs

References