Pseudomonas sp. HPB0071, HMPREF1487_06517

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_06517
NCBI Locus TagHMPREF1487_RS10925
Name
Replicon scaffold_1
Genomic location 2318369 - 2319367 (+ strand)

Cross-References

RefSeq WP_010796712.1
GI 498495982
INSDC ENA32795.1
NCBI Locus Tag HMPREF1487_RS10925
NCBI Old Locus Tag HMPREF1487_06517
UniParc UPI0002C8F493
UniProtKB Acc N2J639
UniProtKB ID N2J639_9PSED
UniRef100 UniRef100_N2J639
UniRef50 UniRef50_Q3A659
UniRef90 UniRef90_N2J639

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.89
Kyte-Doolittle Hydrophobicity Value -0.192
Molecular Weight (kDa) 36.2
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004799 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_06517

Human Homologs

References

No references are associated with this feature.