Pseudomonas sp. HPB0071, HMPREF1487_06083

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_06083
NCBI Locus Tag	HMPREF1487_RS08795
Name
Replicon	scaffold_1
Genomic location	1859470 - 1860687 (+ strand)

Cross-References

RefSeq	WP_010796279.1
GI	498495546
INSDC	ENA34423.1
NCBI Locus Tag	HMPREF1487_RS08795
NCBI Old Locus Tag	HMPREF1487_06083
UniParc	UPI0002CBC2CA
UniProtKB Acc	N2JKJ7
UniProtKB ID	N2JKJ7_9PSED
UniRef100	UniRef100_N2JKJ7
UniRef50	UniRef50_Q9I360
UniRef90	UniRef90_N2JKJ7

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion system FHA domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.60
Kyte-Doolittle Hydrophobicity Value	-0.553
Molecular Weight (kDa)	45.4
Isoelectric Point (pI)	5.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000080 (805 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_06083 Search term: type VI secretion system FHA domain-containing protein

Human Homologs

References