Pseudomonas sp. HPB0071, HMPREF1487_06080

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_06080
NCBI Locus Tag	HMPREF1487_RS08780
Name
Replicon	scaffold_1
Genomic location	1855133 - 1857739 (+ strand)

Cross-References

RefSeq	WP_010796276.1
GI	498495543
INSDC	ENA34420.1
NCBI Locus Tag	HMPREF1487_RS08780
NCBI Old Locus Tag	HMPREF1487_06080
UniParc	UPI0002C90F3C
UniProtKB Acc	N2JAT1
UniProtKB ID	N2JAT1_9PSED
UniRef100	UniRef100_N2JAT1
UniRef50	UniRef50_A9FKV2
UniRef90	UniRef90_N2JAT1

Product

Feature Type	CDS
Coding Frame	1
Product Name	ClpV1 family type VI secretion ATPase
Synonyms
Evidence for Translation
Charge (pH 7)	-20.82
Kyte-Doolittle Hydrophobicity Value	-0.122
Molecular Weight (kDa)	94.5
Isoelectric Point (pI)	5.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000089 (1168 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_06080 Search term: ClpV1 family type VI secretion ATPase

Human Homologs

References