Pseudomonas sp. HPB0071, HMPREF1487_05838

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_05838
NCBI Locus TagHMPREF1487_RS07580
Name
Replicon scaffold_1
Genomic location 1579928 - 1581955 (- strand)

Cross-References

RefSeq WP_010796041.1
GI 498495308
INSDC ENA34185.1
NCBI Locus Tag HMPREF1487_RS07580
NCBI Old Locus Tag HMPREF1487_05838
UniParc UPI0002CC723E
UniProtKB Acc N2JA43
UniProtKB ID N2JA43_9PSED
UniRef100 UniRef100_N2JA43
UniRef50 UniRef50_A4VGA2
UniRef90 UniRef90_N2JA43

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.59
Kyte-Doolittle Hydrophobicity Value -0.204
Molecular Weight (kDa) 74.5
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004474 (501 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_05838

Human Homologs

References

No references are associated with this feature.