Pseudomonas sp. HPB0071, HMPREF1487_05686

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_05686
NCBI Locus Tag	HMPREF1487_RS06835
Name
Replicon	scaffold_1
Genomic location	1401440 - 1402315 (- strand)

Cross-References

RefSeq	WP_010795892.1
GI	498495158
INSDC	ENA35158.1
NCBI Locus Tag	HMPREF1487_RS06835
NCBI Old Locus Tag	HMPREF1487_05686
UniParc	UPI0002CA6DBE
UniProtKB Acc	N2JME7
UniProtKB ID	N2JME7_9PSED
UniRef100	UniRef100_N2JME7
UniRef50	UniRef50_G8Q4Y5
UniRef90	UniRef90_N2JME7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.19
Kyte-Doolittle Hydrophobicity Value	-0.027
Molecular Weight (kDa)	32.2
Isoelectric Point (pI)	6.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004529 (504 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_05686

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 4.1e-14 Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 4.1e-14 Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 4.1e-14 Percent Identity: 25.3

References