Pseudomonas sp. HPB0071, HMPREF1487_05596

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_05596
NCBI Locus TagHMPREF1487_RS06410
Name
Replicon scaffold_1
Genomic location 1309485 - 1310597 (+ strand)

Cross-References

RefSeq WP_010795802.1
GI 498495068
INSDC ENA35068.1
NCBI Locus Tag HMPREF1487_RS06410
NCBI Old Locus Tag HMPREF1487_05596
UniParc UPI0002CB5193
UniProtKB Acc N2JM77
UniProtKB ID N2JM77_9PSED
UniRef100 UniRef100_N2JM77
UniRef50 UniRef50_Q48K50
UniRef90 UniRef90_N2JM77

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.37
Kyte-Doolittle Hydrophobicity Value -0.132
Molecular Weight (kDa) 40.3
Isoelectric Point (pI) 6.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005149 (398 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_05596

Human Homologs

References

No references are associated with this feature.