Pseudomonas sp. HPB0071, HMPREF1487_05568

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_05568
NCBI Locus Tag	HMPREF1487_RS06275
Name
Replicon	scaffold_1
Genomic location	1279892 - 1283038 (+ strand)

Cross-References

RefSeq	WP_010795774.1
GI	498495039
INSDC	ENA36203.1
NCBI Locus Tag	HMPREF1487_RS06275
NCBI Old Locus Tag	HMPREF1487_05568
UniParc	UPI0002CB47C5
UniProtKB Acc	N2JQB1
UniProtKB ID	N2JQB1_9PSED
UniRef100	UniRef100_N2JQB1
UniRef50	UniRef50_C6WY21
UniRef90	UniRef90_N2JQB1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-4.72
Kyte-Doolittle Hydrophobicity Value	0.328
Molecular Weight (kDa)	113.0
Isoelectric Point (pI)	6.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000417 (2093 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_05568 Search term: hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter

Human Homologs

References