Pseudomonas sp. HPB0071, HMPREF1487_05516

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_05516
NCBI Locus TagHMPREF1487_RS06020
Name
Replicon scaffold_1
Genomic location 1216605 - 1217243 (+ strand)

Cross-References

RefSeq WP_010795722.1
GI 498494987
INSDC ENA36151.1
NCBI Locus Tag HMPREF1487_RS06020
NCBI Old Locus Tag HMPREF1487_05516
UniParc UPI0002C8CD8E
UniProtKB Acc N2JJ88
UniProtKB ID N2JJ88_9PSED
UniRef100 UniRef100_N2JJ88
UniRef50 UniRef50_Q5E8S8
UniRef90 UniRef90_N2JJ88

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.18
Kyte-Doolittle Hydrophobicity Value 0.798
Molecular Weight (kDa) 24.0
Isoelectric Point (pI) 9.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000013 (337 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_05516

Human Homologs

References

No references are associated with this feature.