Pseudomonas sp. HPB0071, HMPREF1487_05369

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_05369
NCBI Locus Tag	HMPREF1487_RS05325
Name
Replicon	scaffold_1
Genomic location	1064894 - 1066414 (- strand)

Cross-References

RefSeq	WP_010795577.1
GI	498494842
INSDC	ENA36006.1
NCBI Locus Tag	HMPREF1487_RS05325
NCBI Old Locus Tag	HMPREF1487_05369
UniParc	UPI0002CB251C
UniProtKB Acc	N2JIZ8
UniProtKB ID	N2JIZ8_9PSED
UniRef100	UniRef100_N2JIZ8
UniRef50	UniRef50_Q7VZD2
UniRef90	UniRef90_N2JIZ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	NodT family efflux transporter, outer membrane factor (OMF) lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.78
Kyte-Doolittle Hydrophobicity Value	-0.349
Molecular Weight (kDa)	55.2
Isoelectric Point (pI)	6.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000418 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_05369 Search term: NodT family efflux transporter, outer membrane factor (OMF) lipoprotein

Human Homologs

References