Pseudomonas sp. HPB0071, HMPREF1487_05178

Gene Feature Overview

Strain	Pseudomonas sp. HPB0071 GCF_000478505.2|latest
Locus Tag	HMPREF1487_05178
NCBI Locus Tag	HMPREF1487_RS04405
Name
Replicon	scaffold_1
Genomic location	876002 - 876895 (+ strand)

Cross-References

RefSeq	WP_010795391.1
GI	498494656
INSDC	ENA35820.1
NCBI Locus Tag	HMPREF1487_RS04405
NCBI Old Locus Tag	HMPREF1487_05178
UniParc	UPI0002CB1E87
UniProtKB Acc	N2JEW4
UniProtKB ID	N2JEW4_9PSED
UniRef100	UniRef100_N2JEW4
UniRef50	UniRef50_A0A031MD39
UniRef90	UniRef90_N2JEW4

Product

Feature Type	CDS
Coding Frame	1
Product Name	TonB family domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.49
Kyte-Doolittle Hydrophobicity Value	-0.543
Molecular Weight (kDa)	33.0
Isoelectric Point (pI)	9.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000397 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: HMPREF1487_05178 Search term: TonB family domain-containing protein

Human Homologs

References