Pseudomonas sp. HPB0071, HMPREF1487_05171

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_05171
NCBI Locus TagHMPREF1487_RS04370
Name
Replicon scaffold_1
Genomic location 863040 - 870179 (- strand)

Cross-References

RefSeq WP_010795384.1
GI 498494649
INSDC ENA35813.1
NCBI Locus Tag HMPREF1487_RS04370
NCBI Old Locus Tag HMPREF1487_05171
UniParc UPI0002C91AA5
UniProtKB Acc N2JPA0
UniProtKB ID N2JPA0_9PSED
UniRef100 UniRef100_N2JPA0
UniRef50 UniRef50_N2JPA0
UniRef90 UniRef90_N2JPA0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -235.94
Kyte-Doolittle Hydrophobicity Value -0.306
Molecular Weight (kDa) 262.1
Isoelectric Point (pI) 4.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000404 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_05171

Human Homologs

References

No references are associated with this feature.