Pseudomonas sp. GM41(2012), PMI27_005905

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_005905
NCBI Locus Tag	PMI27_RS27100
Name
Replicon	ctg12
Genomic location	28217 - 29494 (- strand)

Cross-References

RefSeq	WP_008148205.1
GI	495423508
INSDC	EUB76693.1
NCBI Locus Tag	PMI27_RS27100
NCBI Old Locus Tag	PMI27_005905
UniParc	UPI00026FF7FF
UniProtKB Acc	W6VC32
UniProtKB ID	W6VC32_9PSED
UniRef100	UniRef100_W6VC32
UniRef50	UniRef50_P22256
UniRef90	UniRef90_G8PZ77

Product

Feature Type	CDS
Coding Frame	1
Product Name	4-aminobutyrate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.07
Kyte-Doolittle Hydrophobicity Value	0.207
Molecular Weight (kDa)	44.9
Isoelectric Point (pI)	6.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000263 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_005905 Search term: 4-aminobutyrate aminotransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000357838 ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091] E-value: 5.2e-42 Percent Identity: 30.5

References