Pseudomonas sp. GM41(2012), PMI27_000078

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_000078
NCBI Locus Tag	PMI27_RS26390
Name
Replicon	ctg1
Genomic location	83604 - 84302 (- strand)

Cross-References

RefSeq	WP_008153881.1
GI	495429185
INSDC	EUB76463.1
NCBI Locus Tag	PMI27_RS26390
NCBI Old Locus Tag	PMI27_000078
UniParc	UPI000270011B
UniProtKB Acc	W6VBG8
UniProtKB ID	W6VBG8_9PSED
UniRef100	UniRef100_W6VBG8
UniRef50	UniRef50_P42315
UniRef90	UniRef90_Q4KEA3

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinyl-CoA:3-ketoacid-CoA transferase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.12
Kyte-Doolittle Hydrophobicity Value	-0.103
Molecular Weight (kDa)	25.1
Isoelectric Point (pI)	5.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003436 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_000078 Search term: succinyl-CoA:3-ketoacid-CoA transferase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 1.6e-69 Percent Identity: 55.6

References