Pseudomonas sp. GM41(2012), PMI27_003735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM41(2012)
GCF_000282315.2|latest
Locus Tag
PMI27_003735
NCBI Locus TagPMI27_RS08685
Name
Replicon ctg3
Genomic location 1297846 - 1299333 (- strand)

Cross-References

RefSeq WP_008147563.1
GI 495422866
INSDC EUB73992.1
NCBI Locus Tag PMI27_RS08685
NCBI Old Locus Tag PMI27_003735
UniParc UPI0002703A68
UniProtKB Acc W6VBI2
UniProtKB ID W6VBI2_9PSED
UniRef100 UniRef100_W6VBI2
UniRef50 UniRef50_Q887N8
UniRef90 UniRef90_Q887N8

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) -0.45
Kyte-Doolittle Hydrophobicity Value -0.370
Molecular Weight (kDa) 54.9
Isoelectric Point (pI) 6.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001808 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI27_003735
Search term: RNA helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.9e-66
Percent Identity: 39.5

References

No references are associated with this feature.