Pseudomonas sp. GM41(2012), PMI27_002793

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_002793
NCBI Locus Tag	PMI27_RS13310
Name
Replicon	ctg3
Genomic location	257637 - 257777 (+ strand)

Cross-References

RefSeq	WP_008150087.1
GI	495425390
INSDC	EUB73050.1
NCBI Locus Tag	PMI27_RS13310
NCBI Old Locus Tag	PMI27_002793
UniParc	UPI0002704B7A
UniProtKB Acc	W6V0H8
UniProtKB ID	W6V0H8_9PSED
UniRef100	UniRef100_W6V0H8
UniRef50	UniRef50_Q87U84
UniRef90	UniRef90_V8R139

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.15
Kyte-Doolittle Hydrophobicity Value	-0.252
Molecular Weight (kDa)	5.1
Isoelectric Point (pI)	9.28

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003719 (396 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_002793 Search term: type VI secretion protein

Human Homologs

References