Pseudomonas sp. GM41(2012), PMI27_002783

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_002783
NCBI Locus Tag	PMI27_RS13360
Name
Replicon	ctg3
Genomic location	245499 - 247055 (+ strand)

Cross-References

RefSeq	WP_008150077.1
GI	495425380
INSDC	EUB73040.1
NCBI Locus Tag	PMI27_RS13360
NCBI Old Locus Tag	PMI27_002783
UniParc	UPI0002704B70
UniProtKB Acc	W6V0G6
UniProtKB ID	W6V0G6_9PSED
UniRef100	UniRef100_W6V0G6
UniRef50	UniRef50_I2BPP2
UniRef90	UniRef90_Q3K4H1

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion protein ImpA
Synonyms
Evidence for Translation
Charge (pH 7)	-3.36
Kyte-Doolittle Hydrophobicity Value	-0.244
Molecular Weight (kDa)	58.6
Isoelectric Point (pI)	6.62

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000081 (1178 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_002783 Search term: type VI secretion protein ImpA

Human Homologs

References