Pseudomonas sp. GM41(2012), PMI27_002663

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_002663
NCBI Locus Tag	PMI27_RS13960
Name
Replicon	ctg3
Genomic location	101736 - 103046 (+ strand)

Cross-References

RefSeq	WP_008155681.1
GI	495430986
INSDC	EUB72920.1
NCBI Locus Tag	PMI27_RS13960
NCBI Old Locus Tag	PMI27_002663
UniParc	UPI0002704C08
UniProtKB Acc	W6V007
UniProtKB ID	W6V007_9PSED
UniRef100	UniRef100_W6V007
UniRef50	UniRef50_Q4KKR1
UniRef90	UniRef90_Q4KKR1

Product

Feature Type	CDS
Coding Frame	1
Product Name	16S rRNA methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	0.18
Kyte-Doolittle Hydrophobicity Value	-0.030
Molecular Weight (kDa)	47.2
Isoelectric Point (pI)	7.04

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000017 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_002663 Search term: 16S rRNA methyltransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000439422 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 2.4e-26 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000371858 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 2.4e-26 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000444437 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 2.4e-26 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000313272 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 2.4e-26 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000443150 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 2.4e-26 Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14	ENSP00000382392 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 2.4e-26 Percent Identity: 31.8

References