Pseudomonas sp. GM41(2012), PMI27_003964

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_003964
NCBI Locus Tag	PMI27_RS07550
Name
Replicon	ctg4
Genomic location	151803 - 152402 (- strand)

Cross-References

RefSeq	WP_008147290.1
GI	495422593
INSDC	EUB72042.1
NCBI Locus Tag	PMI27_RS07550
NCBI Old Locus Tag	PMI27_003964
UniParc	UPI0002701940
UniProtKB Acc	W6V512
UniProtKB ID	W6V512_9PSED
UniRef100	UniRef100_W6V512
UniRef50	UniRef50_M5CV01
UniRef90	UniRef90_J2SJX0

Product

Feature Type	CDS
Coding Frame	1
Product Name	short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.08
Kyte-Doolittle Hydrophobicity Value	0.122
Molecular Weight (kDa)	21.0
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001028 (423 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_003964 Search term: short-chain dehydrogenase

Human Homologs

References