Pseudomonas aeruginosa C20, Q085_06045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa C20 - Assembly GCF_000480515.1
GCF_000480515.1|latest
Locus Tag
Q085_06045
Name
Replicon scaffold_3
Genomic location 591459 - 593798 (+ strand)

Cross-References

RefSeq WP_003100071.1
GI 489190706
NCBI Locus Tag Q085_06045

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.13
Kyte-Doolittle Hydrophobicity Value -0.285
Molecular Weight (kDa) 85.0
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2OCE STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12/20/06 Crystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 3.1 X-RAY DIFFRACTION 99.9
3BZC RNA BINDING PROTEIN 01/17/08 Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form I Pseudomonas aeruginosa 2.27 X-RAY DIFFRACTION 100.0
3BZK RNA BINDING PROTEIN 01/18/08 Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form 2 Pseudomonas aeruginosa 2.3 X-RAY DIFFRACTION 100.0

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004785 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Q085_06045

Human Homologs

Ensembl 110, assembly GRCh38.p14
S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
E-value: 1.5e-98
Percent Identity: 33.6

References

No references are associated with this feature.