Pseudomonas sp. URMO17WK12:I12, D882_RS0125670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. URMO17WK12:I12
GCF_000514395.1|latest |
| Locus Tag |
D882_RS0125670
|
| Name |
|
| Replicon | scaffold00019.19_C |
| Genomic location | 101337 - 102944 (- strand) |
Cross-References
| RefSeq | WP_027925891.1 |
| GI | 654455464 |
| NCBI Locus Tag | D882_RS0125670 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
decarboxylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.04 |
| Kyte-Doolittle Hydrophobicity Value | 0.089 |
| Molecular Weight (kDa) | 56.5 |
| Isoelectric Point (pI) | 5.90 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004591 (364 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: D882_RS0125670
Search term: decarboxylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
2-hydroxyacyl-CoA lyase 1 [Source:HGNC Symbol;Acc:HGNC:17856]
E-value:
6.6e-34
Percent Identity:
25.0
|
References
No references are associated with this feature.