Pseudomonas chlororaphis O6, PchlO6_6182 (tssF2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis O6
GCF_000264555.1|latest |
| Locus Tag |
PchlO6_6182
|
| Name |
tssF2
|
| Replicon | chromosome |
| Genomic location | 6824627 - 6826414 (- strand) |
Cross-References
| RefSeq | WP_007930278.1 |
| GI | 495205497 |
| NCBI Locus Tag | PchlO6_6182 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.10 |
| Kyte-Doolittle Hydrophobicity Value | -0.309 |
| Molecular Weight (kDa) | 68.1 |
| Isoelectric Point (pI) | 6.28 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000087 (1217 members) |
| Putative Inparalogs |
1 predicted inparalogs type VI secretion protein TssF (PchlO6_6099) 26.1% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PchlO6_6182
Search term: tssF2
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.