Pseudomonas chlororaphis O6, PchlO6_3383 (aprD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis O6
GCF_000264555.1|latest |
| Locus Tag |
PchlO6_3383
|
| Name |
aprD
|
| Replicon | chromosome |
| Genomic location | 3726337 - 3728151 (- strand) |
Cross-References
| RefSeq | WP_009049218.1 |
| GI | 496340040 |
| NCBI Locus Tag | PchlO6_3383 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
peptidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 12.11 |
| Kyte-Doolittle Hydrophobicity Value | 0.138 |
| Molecular Weight (kDa) | 65.0 |
| Isoelectric Point (pI) | 9.87 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001198 (779 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PchlO6_3383
Search term: aprD
Search term: peptidase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
1.6e-36
Percent Identity:
33.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
1.6e-36
Percent Identity:
33.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
1.6e-36
Percent Identity:
33.1
|
References
No references are associated with this feature.