Pseudomonas syringae BRIP39023, A988_03468 (carB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae BRIP39023
GCF_000333995.1|latest |
| Locus Tag |
A988_03468
|
| NCBI Locus Tag | A988_RS21920 |
| Name |
carB
|
| Replicon | scaffold3 |
| Genomic location | 483600 - 486821 (- strand) |
Cross-References
| RefSeq | WP_003431538.1 |
| GI | 489526786 |
| EC Number | 6.3.5.5 |
| NCBI Locus Tag | A988_RS21920 |
| NCBI Old Locus Tag | A988_03468 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
carbamoyl phosphate synthase large subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -27.17 |
| Kyte-Doolittle Hydrophobicity Value | -0.090 |
| Molecular Weight (kDa) | 117.6 |
| Isoelectric Point (pI) | 4.95 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004401 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: A988_03468
Search term: carB
Search term: carbamoyl phosphate synthase large subunit
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
1.6e-228
Percent Identity:
41.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
1.6e-228
Percent Identity:
41.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
1.6e-228
Percent Identity:
41.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
1.6e-228
Percent Identity:
41.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
1.6e-228
Percent Identity:
41.0
|
References
No references are associated with this feature.