Pseudomonas aeruginosa PA1R, PA1R_gp5246
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PA1R
GCF_000496645.1|latest |
| Locus Tag |
PA1R_gp5246
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5837618 - 5838133 (+ strand) |
Cross-References
| RefSeq | YP_008807846.1 |
| GI | 558671136 |
| Entrez | 17681329 |
| NCBI Locus Tag | PA1R_gp5246 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Type VI secretion lipoprotein/VasD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.20 |
| Kyte-Doolittle Hydrophobicity Value | -0.038 |
| Molecular Weight (kDa) | 18683.4 |
| Isoelectric Point (pI) | 8.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 79 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000079 (812 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA1R_gp5246
Search term: Type VI secretion lipoprotein/VasD
|
Human Homologs
References
No references are associated with this feature.