Pseudomonas aeruginosa PA1R, PA1R_gp3796

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa PA1R
GCF_000496645.1|latest
Locus Tag
PA1R_gp3796
Name
Replicon chromosome
Genomic location 4239339 - 4240295 (+ strand)

Cross-References

RefSeq YP_008806409.1
GI 558669699
EC Number 3.5.3.11
Entrez 17679892
NCBI Locus Tag PA1R_gp3796

Product

Feature Type CDS
Coding Frame 1
Product Name
Agmatinase
Synonyms
Evidence for Translation
Charge (pH 7) -10.65
Kyte-Doolittle Hydrophobicity Value -0.029
Molecular Weight (kDa) 34.2
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3NIP HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinopropionase complexed with 1,6-diaminohexane Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 99.7
3NIQ HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinopropionase Pseudomonas aeruginosa 2.07 X-RAY DIFFRACTION 99.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 439 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000285 (312 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1R_gp3796
Search term: Agmatinase

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 3.4e-78
Percent Identity: 46.9

References

No references are associated with this feature.