Pseudomonas aeruginosa PA1R, PA1R_gp1970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PA1R
GCF_000496645.1|latest |
| Locus Tag |
PA1R_gp1970
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2206319 - 2207464 (- strand) |
Cross-References
| RefSeq | YP_008804617.1 |
| GI | 558667907 |
| Entrez | 17678100 |
| NCBI Locus Tag | PA1R_gp1970 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative fimbrial protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 7.30 |
| Kyte-Doolittle Hydrophobicity Value | -0.048 |
| Molecular Weight (kDa) | 40.1 |
| Isoelectric Point (pI) | 9.17 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5CYL | CELL ADHESION | 07/30/15 | Crystal structure of the CupB6 tip adhesin from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 2.77 | X-RAY DIFFRACTION | 97.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000955 (1577 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA1R_gp1970
Search term: putative fimbrial protein
|
Human Homologs
References
No references are associated with this feature.