Pseudomonas monteilii SB3101, X970_26010

Gene Feature Overview

Strain	Pseudomonas monteilii SB3101 GCF_000510325.1|latest
Locus Tag	X970_26010
Name
Replicon	chromosome
Genomic location	5600220 - 5600777 (+ strand)

Cross-References

RefSeq	YP_008962896.1
GI	568190197
Entrez	18007400
INSDC	AHC90724.1
NCBI Locus Tag	X970_26010
UniParc	UPI0003D65C12
UniProtKB Acc	V9V5H4
UniProtKB ID	V9V5H4_9PSED
UniRef100	UniRef100_A0A099N942
UniRef50	UniRef50_Q88RQ9
UniRef90	UniRef90_Q88RQ9

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA threonylcarbamoyladenosine biosynthesis protein RimN
Synonyms
Evidence for Translation
Charge (pH 7)	-2.14
Kyte-Doolittle Hydrophobicity Value	-0.111
Molecular Weight (kDa)	20.5
Isoelectric Point (pI)	6.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 632 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000022 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: X970_26010 Search term: tRNA threonylcarbamoyladenosine biosynthesis protein RimN

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000362135 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905] E-value: 4.6e-11 Percent Identity: 29.2

References